TSSG statistics

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Citations per year

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Associated diseases

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TSSG specifications


Unique identifier OMICS_24321
Interface Web user interface
Restrictions to use None
Input data A nucleotide sequence.
Computer skills Basic
Stability Stable
Maintained Yes

Publication for TSSG

TSSG in publications

PMCID: 4252041
PMID: 25461922
DOI: 10.1371/journal.pone.0113732

[…] , . the prediction of promoter and transcription factor binding sites was performed using the nnpp program (http://www.fruitfly.org/seq_tools/promoter.html) and the tssg (http://linux1.softberry.com/berry.phtml) ., autoradiograms were scanned in a gs-800 calibrated imaging densitometer (bio-rad) and protein bands quantified using the quantity one densitometry […]

PMCID: 1810552
PMID: 16925837
DOI: 10.1186/gb-2006-7-s1-s3

[…] regions of predicted genes., for promoter location within the selected regions, we used the fprom (find promoter) program, which is the development of an algorithm realized earlier in the tssw/tssg programs []. for each potential tss position of a given sequence, the fprom program evaluates its possibility to be a tss using two linear discriminant functions (for tata+ and tata- promoters) […]

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TSSG institution(s)
Department of Cell Biology, Baylor College of Medicine, One Baylor Plaza, Houston, TX, USA

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