TSSG statistics

To access cutting-edge analytics on consensus tools, life science contexts and associated fields, you will need to subscribe to our premium service.

Subscribe
info

Citations per year

Citations chart
info

Popular tool citations

chevron_left Promoter prediction chevron_right
Popular tools chart
info

Tool usage distribution map

Tool usage distribution map
info

Associated diseases

Associated diseases

TSSG specifications

Information


Unique identifier OMICS_24321
Name TSSG
Interface Web user interface
Restrictions to use None
Input data A nucleotide sequence.
Computer skills Basic
Stability Stable
Maintained Yes

Publication for TSSG

TSSG in publications

 (2)
PMCID: 4252041
PMID: 25461922
DOI: 10.1371/journal.pone.0113732

[…] , . the prediction of promoter and transcription factor binding sites was performed using the nnpp program (http://www.fruitfly.org/seq_tools/promoter.html) and the tssg (http://linux1.softberry.com/berry.phtml) ., autoradiograms were scanned in a gs-800 calibrated imaging densitometer (bio-rad) and protein bands quantified using the quantity one densitometry […]

PMCID: 1810552
PMID: 16925837
DOI: 10.1186/gb-2006-7-s1-s3

[…] regions of predicted genes., for promoter location within the selected regions, we used the fprom (find promoter) program, which is the development of an algorithm realized earlier in the tssw/tssg programs []. for each potential tss position of a given sequence, the fprom program evaluates its possibility to be a tss using two linear discriminant functions (for tata+ and tata- promoters) […]


To access a full list of publications, you will need to upgrade to our premium service.

TSSG institution(s)
Department of Cell Biology, Baylor College of Medicine, One Baylor Plaza, Houston, TX, USA

TSSG reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review TSSG