Tumor purity software tools | DNA methylation microarray data analysis

In cancer genomics research, one important problem is that the solid tissue sample obtained from clinical settings is always a mixture of cancer and normal cells. The sample mixture brings complication in data analysis and results in biased findings…
InfiniumPurify
Desktop

InfiniumPurify

A simple but effective method to estimate tumor purities from the microarray…

A simple but effective method to estimate tumor purities from the microarray data. Analyses of the TCGA lung cancer data demonstrate favorable performance of the proposed method. InfiniumPurify is…

methylSpectrum
Desktop

methylSpectrum

Deconvolutes of DNA methylation array data into source contributions from…

Deconvolutes of DNA methylation array data into source contributions from distinct cell types. methylSpectrum is a method for inferring changes in the distribution of white blood cells between…

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