Tumorsec specifications

Information


Unique identifier OMICS_10956
Name Tumorsec
Software type Pipeline/Workflow
Interface Command line interface
Restrictions to use None
Input format BED, FASTA, dbSNP, FASTQ
Output format VCF
Operating system Unix/Linux
Computer skills Advanced
Stability Beta
Requirements GCC, Java, Perl, Bwa, samtools, R, SnpEff, VCFtools, Mutascope, Annovar
Maintained Yes

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Documentation


Tumorsec institution(s)
The Moores Cancer Center, UCSD, CA, USA; the Institute of Biomedical Sciences of the University of Chile, Chile

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