tusv specifications

Information


Unique identifier OMICS_31165
Name tusv
Alternative name Tree Unmixing with Structural Variants
Software type Application/Script
Interface Command line interface
Restrictions to use Academic or non-commercial use
Operating system Unix/Linux
Programming languages Python
License MIT License
Computer skills Advanced
Stability Stable
Requirements
numpy, graphviz, ete2, biopython, gurobipy
Maintained Yes

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Maintainer


  • person_outline Russell Schwartz <>

Publication for Tree Unmixing with Structural Variants

tusv institution(s)
Department of Computational Biology, Carnegie Mellon University, Pittsburgh, PA, USA; Department of Biomedical Engineering, Carnegie Mellon University, Pittsburgh, PA, USA; Department of Biological Sciences, Carnegie Mellon University, Pittsburgh, PA, USA
tusv funding source(s)
Supported by the US National Institutes of Health via award R21CA216452 and Pennsylvania Department of Health Grant GBMF4554 #4100070287.

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