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TypeLoader

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Automates the gene feature annotation information and deviations of novel allele from the identified closest known allele requiring minimal intervention. TypeLoader facilitates submission of full-length genomic allele sequences. It aims to aid in the curation and submission of new full-length human leukocyte antigen (HLA) alleles. This tool allows to submit immunogenetics sequence repositories whilst minimizing errors that easily occur otherwise.

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TypeLoader classification

TypeLoader specifications

Software type:
Pipeline/Workflow
Restrictions to use:
None
Input format:
FASTA, XML
Stability:
Stable
Interface:
Application programming interface
Input data:
A full-length novel allele sequence.
Computer skills:
Advanced
Maintained:
Yes

TypeLoader distribution

download

TypeLoader support

Maintainer

  • Vineeth Surendranath <>

Credits

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Publications

Institution(s)

DKMS Life Science Lab, Dresden, Germany; Anthony Nolan Research Institute, Royal Free Hospital, London, UK; UCL Cancer Institute, University College London, London, UK; DKMS, Tübingen, Germany

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