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Ubiquitin-mediated signalling databases | Proteomics

Post-translational modification of cellular proteins by ubiquitin is a pivotal regulatory event that controls not only protein degradation, but also a variety of non-proteolytic functions. Ubiquitination is involved in a broad array of physiological…
UbiProt
Dataset

UbiProt

A knowledge base of ubiquitylated proteins. UbiProt contains retrievable…

A knowledge base of ubiquitylated proteins. UbiProt contains retrievable information about overall characteristics of a particular protein, ubiquitylation features, related ubiquitylation and…

UUCD
Dataset

UUCD Ubiquitin and Ubiquitin-like Conjugation Database

A family-based database for ubiquitin and ubiquitin-like conjugation, which is…

A family-based database for ubiquitin and ubiquitin-like conjugation, which is one of the most important post-translational modifications responsible for regulating a variety of cellular processes,…

UbiNet
Dataset

UbiNet

Offers users an effective platform to efficiently study protein ubiquitylation…

Offers users an effective platform to efficiently study protein ubiquitylation networks among large-scale ubiquitylation data. The current version of UbiNet was designed specifically for humans to…

mUbiSiDa
Dataset

mUbiSiDa mammalian Ubiquitination Site Database

Provides a scientific community with a comprehensive, freely and high-quality…

Provides a scientific community with a comprehensive, freely and high-quality accessible resource of mammalian protein ubiquitination sites. The mUbiSiDa was designed to be a widely used tool for…

E3Net
Dataset

E3Net

Provides a comprehensive collection of available E3-substrate specificities and…

Provides a comprehensive collection of available E3-substrate specificities and a systematic framework for the analysis of E3-mediated regulatory networks of diverse cellular functions. Currently,…

hUbiquitome
Dataset

hUbiquitome

A public resource for the retrieval of experimentally verified human…

A public resource for the retrieval of experimentally verified human ubiquitination enzymes and substrates. hUbiquitome is the first comprehensive database of human ubiquitination cascades.…

plantsUPS
Dataset

plantsUPS

A database of higher plants' ubiquitin 26S/proteasome system (UPS). Both…

A database of higher plants' ubiquitin 26S/proteasome system (UPS). Both automated search and manual curation were performed in identifying candidate genes. Extensive annotations referring to…

SCUD
Dataset

SCUD Saccharomyces Cerevisiae Ubiquitination Database

A web-based database for the ubiquitination system in Saccharomyces cerevisiae…

A web-based database for the ubiquitination system in Saccharomyces cerevisiae (Baker's yeast). SCUD aims to represent a comprehensive yeast ubiquitination system, and is easily expandable with…

PlantsUBQ
Dataset

PlantsUBQ

Describes the network of Arabidopsis proteins responsible for the covalent…

Describes the network of Arabidopsis proteins responsible for the covalent attachment of ubiquitin (Ub). PlantsUBQ provides comprehensive information on the role of this post-translational…

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