Protein ubiquitination is one of the most important reversible post-translational modifications (PTMs). In many biochemical, pathological and pharmaceutical studies on understanding the function of proteins in biological processes, identification of ubiquitination sites is an…
Web app
ESA-UbiSite ESA-UbiSite

ESA-UbiSite

Identifies human ubiquitination sites. The main concept of this ESA follows the…

Identifies human ubiquitination sites. The main concept of this ESA follows the principle of natural selection, i.e. survival of the fittest in a changing environment. The identification of putative…

Web app
PTMProber PTMProber

PTMProber

A homology-based pipeline that allows identification of potential modification…

A homology-based pipeline that allows identification of potential modification sites for most of the proteomes lacking post-translational modifications (PTMs) data. PTMProber provides a unique…

UbiNet UbiNet

UbiNet

Offers users an effective platform to efficiently study protein ubiquitylation…

Offers users an effective platform to efficiently study protein ubiquitylation networks among large-scale ubiquitylation data. The current version of UbiNet was designed specifically for humans to…

Web app
PhosphOrtholog PhosphOrtholog

PhosphOrtholog

Enables mapping of thousands of novel and known protein phosphorylation sites…

Enables mapping of thousands of novel and known protein phosphorylation sites across species, accessible through an easy-to-use web interface. This is achieved through pairwise sequence alignment of…

Web app
iUbiq-Lys iUbiq-Lys

iUbiq-Lys

A web server that could predict ubiquitination sites in proteins. With the…

A web server that could predict ubiquitination sites in proteins. With the assistance of SVM, the highlight of iUbiq-Lys is to employ amino acid sequence features extracted from the sequence…

Web app
UbiProber UbiProber

UbiProber

Designed for large-scale predictions of both general and species-specific…

Designed for large-scale predictions of both general and species-specific ubiquitylation sites.

Web app
UbPred UbPred

UbPred

A random forest-based predictor of potential ubiquitination sites in proteins.

A random forest-based predictor of potential ubiquitination sites in proteins.

Web app
hCKSAAP_UbSite Deprecated hCKSAAP_UbSite

hCKSAAP_UbSite

A human-specific ubiquitination site predictor through the integration of…

A human-specific ubiquitination site predictor through the integration of multiple complementary classifiers. Firstly, a Support Vector Machine (SVM) classier was constructed based on the composition…

Web app
UbiPred Deprecated UbiPred

UbiPred

An informative physicochemical property mining algorithm for mining informative…

An informative physicochemical property mining algorithm for mining informative physicochemical properties from protein sequences to build an SVM-based prediction system. UbiPred can predict…

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