uCount specifications

Information


Unique identifier OMICS_03947
Name uCount
Interface Web user interface
Restrictions to use None
Computer skills Basic
Stability Stable
Maintained Yes

uCount in publications

 (2)
PMCID: 5363848
PMID: 28333956
DOI: 10.1371/journal.pone.0174052

[…] would improve the performance of our k-spectrum kernel models. the engineered features, normalized by sequence length, were:, 4 features: number of as, us, gs or cs found in each sequence (acount, ucount, gcount, ccount)., 2 features: number of contiguous as or us found in each sequence (arepeatedcount, urepeatedcount)., total number of au-rich dimers (aa, au, ua, uu) found in each sequences […]

PMCID: 5129438
PMID: 27920993
DOI: 10.1016/j.bdq.2014.08.001

[…] spreadsheet. alternatively, web-based calculators that use binomial distributions are available. online tools include ucountsm from the wittwer lab at the university of utah (https://dna.utah.edu/ucount/uc.php) or the exact binomial and poisson confidence intervals calculator by john c. pezzullo (http://statpages.org/confint.html) ., with the raindrop® dpcr system, 25–50 μl samples […]


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