UCSC Proteome Browser specifications


Unique identifier OMICS_21393
Name UCSC Proteome Browser
Restrictions to use None
Database management system MySQL
Community driven No
Data access File download, Browse
User data submission Not allowed
Version 1.0
Maintained Yes


  • Primates
    • Homo sapiens
  • Rodents
    • Mus musculus
    • Rattus norvegicus


  • person_outline Fan Hsu

Publication for UCSC Proteome Browser


The UCSC Proteome Browser

2005 Nucleic Acids Res
PMCID: 540054
PMID: 15608236
DOI: 10.1093/nar/gki100

UCSC Proteome Browser citation


A Novel Type III Endosome Transmembrane Protein, TEMP

PMCID: 3901140
PMID: 24710541
DOI: 10.3390/cells1041029
call_split See protocol

[…] [] for signal peptides and InterProScan [,,] for the prediction of protein domains. Further details including putative glycosylation sites were obtained from the University of California Santa Cruz (UCSC) proteome browser [,]. SymAtlas developed by the Genomics Institute of the Novartis Research Foundation (GNF) [] was used to analyse the gene expression patterns of the proteins investigated. Ort […]

UCSC Proteome Browser institution(s)
Center for Biomolecular Science and Engineering, School of Engineering, Santa Cruz, CA, USA; Howard Hughes Medical Institute, University of California Santa Cruz (UCSC), Santa Cruz, CA, USA; Sperling Biomedical Foundation, Eugene, OR, USA
UCSC Proteome Browser funding source(s)
Supported by National Human Genome Research Institute (NHGRI) and the Howard Hughes Medical Institute (HHMI).

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