UltraPse specifications


Unique identifier OMICS_24493
Name UltraPse
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Windows
Programming languages C++
License GNU General Public License version 3.0
Computer skills Advanced
Version 1.0
Stability Stable
Maintained Yes



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  • person_outline Pufeng Du <>
  • person_outline Likun Wang <>
  • person_outline Wei Zhao <>
  • person_outline Yang-Yang Miao <>
  • person_outline Le-Yi Wei <>

Publication for UltraPse

UltraPse in publication

PMCID: 5855758
PMID: 29439426
DOI: 10.3390/ijms19020536

[…] recent studies showed that evolutionary information and the sequence-order effects are very important for extracting the features of proteins [,]. in their special issue, du et al. [] developed the ultrapse program to convert biological sequences into digital features. unlike the pseaac-builder [] or pseaac-general [], the ultrapse program can be used on dna/rna sequences as well as protein […]

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UltraPse institution(s)
School of Computer Science and Technology, Tianjin University, Tianjin, China; School of Chemical Engineering, Tianjin University, Tianjin, China; Institute of Systems Biomedicine, Beijing Key Laboratory of Tumor Systems Biology, Department of Pathology, School of Basic Medical Sciences, Peking University Health Science Center, Beijing, China
UltraPse funding source(s)
Supported by the National Natural Science Foundation of China (NSFC 31401132); National Natural Science Foundation of China (NSFC 61005041); Tianjin Natural Science Foundation (No. 12JCQNJC02300).

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