UltraTracer specifications


Unique identifier OMICS_13586
Name UltraTracer
Alternative name Vaa3D
Software type Package/Module
Interface Graphical user interface
Restrictions to use None
Input data Neuron image data, 2D TIFF/Vaa3D raw files, single multipage 3D TIFF/Vaa3D raw file, three-leveled y-x-z hierarchy of tiles with 3D TIFF/Vaa3D raw files, HDF5 volume
Output data Neuron structure 3-D image volumes
Operating system Unix/Linux
Programming languages C++
License MIT License
Computer skills Medium
Version 1.2
Maintained Yes


No version available


  • person_outline Hanchuan Peng

Publication for UltraTracer

UltraTracer institution(s)
Allen Institute for Brain Science, Seattle, WA, USA; Erasmus University Medical Center Rotterdam, Rotterdam, Netherlands; Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA; Krasnow Institute for Advanced Study, George Mason University, Fairfax, VA, USA
UltraTracer funding source(s)
This work was funded by the Allen Institute for Brain Science.

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