Examines Sanger sequencing traces from amplicon mixtures for measuring the fractional abundance of individual strains within simple model communities. CASEU fits mixed-strain electropherograms as linear combinations of time-warped single-strain electropherograms. It allows a wide range of simple synthetic microbial communities that were previously time- or cost-prohibitive. This tool contains a metric that enables users to identify and exclude problematic samples.
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