Unclassified tools | Synthetic biology
Web app
GenBank Converter GenBank Converter

GenBank Converter

A webapp which converts Genbank format sequence files to and from SBOL XML…

A webapp which converts Genbank format sequence files to and from SBOL XML format files.

Web app
Finch Finch

Finch

A web app for combinatorial genetic design space generation. Finch needs…

A web app for combinatorial genetic design space generation. Finch needs inscription to the web platform Synbiotools to be accessible.

Web app
Synbiotools Synbiotools

Synbiotools

A workflow for synthetic biology. Synbiotools contains a tool for design…

A workflow for synthetic biology. Synbiotools contains a tool for design visualization (Pigeon) without inscription needed. After inscription to this platform, it also contains a tool for…

Desktop app
Standard Biological… Standard Biological Parts knowledgebase

SBPkb Standard Biological Parts knowledgebase

A publically accessible semantic web resource for synthetic biology. The SBPkb…

A publically accessible semantic web resource for synthetic biology. The SBPkb allows researchers to query and retrieve standard biological parts for research and use in synthetic biology.

Web app
GoSynthetic GoSynthetic

GoSynthetic

Provides a simple and fast way to analyse biological processes applying a…

Provides a simple and fast way to analyse biological processes applying a hierarchical database. Four different search modes are implemented. Furthermore, protein interaction data, cross-links to…

Desktop app
Eugene Eugene

Eugene

An ecosystem of human- and machine-readable languages developed to speed up and…

An ecosystem of human- and machine-readable languages developed to speed up and innovate the design of novel biological DNA Sequences, Parts, Devices, and Systems.

Synthetic Biology… Synthetic Biology Open Language

SBOL Synthetic Biology Open Language

A data exchange standard for descriptions of genetic parts, devices, modules,…

A data exchange standard for descriptions of genetic parts, devices, modules, and systems. SBOL represents synthetic biology designs in a community-driven, formalized format for exchange between…

Desktop app
REACT Deprecated REACT

REACT

Contains a novel network inference algorithm within the algebraic framework of…

Contains a novel network inference algorithm within the algebraic framework of Boolean polynomial dynamical system (BPDS). The algorithm considers time series data, including that of perturbation…

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