Protocols

Uniclust specifications

Information


Unique identifier OMICS_14696
Name Uniclust
Restrictions to use None
Community driven No
Data access File download, Browse
User data submission Not allowed
Maintained Yes

Documentation


Maintainer


  • person_outline Martin Steinegger

Publication for Uniclust

Uniclust citation

call_split

FIGL1 and its novel partner FLIP form a conserved complex that regulates homologous recombination

2018
PLoS Genet
PMCID: 5897033
PMID: 29608566
DOI: 10.1371/journal.pgen.1007317
call_split See protocol

[…] ategies based on the sequence divergence and the existence of paralogs. Since FLIP sequence diverged significantly during evolution without detectable paralog, 3 iterations of HHblits [,] against the uniclust30_2017_04 database were sufficient to retrieve 139 sequences belonging to plants and metazoa species. To get NCBI entries of those proteins, a PSSM generated from the recovered alignment was […]

Uniclust institution(s)
Quantitative and Computational Biology Group, Max Planck Institute for Biophysical Chemistry, Gottingen, Germany; European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Cambridge, UK; Department for Bioinformatics and Computational Biology, Technische Universität Munchen, Munich, Germany; Department of Chemistry, Seoul National University, Seoul, Korea
Uniclust funding source(s)
Supported by European Research Council in the framework of its Horizon 2020 Framework Programme for Research and Innovation [‘Virus-X’, project no. 685778]; German Federal Ministry of Education and Research (BMBF) within the frameworks of e:Med and e:Bio [e:AtheroSysMed 01ZX1313D, SysCore 0316176A].

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