Uniform Projection Motif Finder statistics

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Tool usage distribution map

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Associated diseases

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Uniform Projection Motif Finder specifications


Unique identifier OMICS_21813
Name Uniform Projection Motif Finder
Software type Application/Script
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages C
Computer skills Advanced
Stability Stable
Maintained Yes



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  • person_outline Benjamin RaphaĆ«l <>
  • person_outline George Varghese <>

Publication for Uniform Projection Motif Finder

Uniform Projection Motif Finder in publication

PMCID: 4022013
PMID: 24555784
DOI: 10.1186/1745-6150-9-4

[…] they are considered as good candidates for motifs. the algorithm searches these buckets for the candidates of motifs []., some examples of projection-based algorithms are projection [] and uniform projection motif finder (upmf) []., this approach recasts the motif finding problem into graph solving problem in which nodes correspond to substrings of input sequences and edges connecting […]

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Uniform Projection Motif Finder institution(s)
Department of Computer Science and Engineering, University of California, San Diego, La Jolla, CA, USA
Uniform Projection Motif Finder funding source(s)
Supported by a fellowship from the Alfred P. Sloan Foundation.

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