Uniprime specifications


Unique identifier OMICS_02369
Name Uniprime
Alternative name Universal primer design webservice
Interface Web user interface
Restrictions to use None
Computer skills Basic
Version 2.0
Stability No
Maintained No


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Publications for Universal primer design webservice

Uniprime citations


Designing universal primers for the isolation of DNA sequences encoding Proanthocyanidins biosynthetic enzymes in Crataegus aronia

BMC Res Notes
PMCID: 3492024
PMID: 22883984
DOI: 10.1186/1756-0500-5-427

[…] primers and increase probability of producing non-targeted amplicons [,].Several public databases have been developed for designing universal primers for a particular gene across different taxa, e.g. UniPrime [], and UniPrime2 []. The alignment PCR protocol described in this study adapts the same principles, parameters and approaches for universal primers design described in the public databases. […]


Sliding Window Analyses for Optimal Selection of Mini Barcodes, and Application to 454 Pyrosequencing for Specimen Identification from Degraded DNA

PLoS One
PMCID: 3362555
PMID: 22666489
DOI: 10.1371/journal.pone.0038215

[…] the current version of SPIDER does not provide functions for designing of the actual primers; many other software packages are specifically designed for this purpose, e.g. Qprimer , Green SCPrimer , Uniprime , ecoPrimers , etc. However, the nucleotide diagnostics functions of SPIDER can be used to identify sites useful for group specific primer design, and can then be used together with other pro […]

Uniprime institution(s)
UCD School of Computer Science and Informatics, University College Dublin, Belfield, Dublin, Ireland; UCD School of Biology and Environmental Science & UCD Conway Institute of Biomolecular, University College Dublin, Belfield, Dublin, Ireland; Biomedical Research, University College Dublin, Belfield, Dublin, Ireland
Uniprime funding source(s)
Supported by the Science Foundation Ireland PIYRA 06/YI3/B932 awarded.

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