UMI-tools specifications

Unique identifier:
OMICS_15010
Software type:
Package/Module
Restrictions to use:
None
Operating system:
Unix/Linux, Mac OS
License:
MIT License
Stability:
Stable
Maintained:
Yes
Name:
Unique Molecular Identifiers-tools
Interface:
Command line interface
Input format:
BAM, FASTQ
Programming languages:
Python
Computer skills:
Advanced
Requirements:
Numpy, Pandas, cython, pysam, future, setuptools

versioning

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No versioning.

UMI-tools distribution

download

UMI-tools support

Documentation

Maintainer

  • Ian Sudbery <>

forum

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Credits

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Publications

Institution(s)

Computational Genomics Analysis and Training Programme, MRC WIMM Centre for Computational Biology, University of Oxford, John Radcliffe Hospital/Headley Way, Oxford, UK; Department of Molecular Biology and Biotechnology, University of Sheffield, Firth Court, Western Bank, Sheffield, UK

Funding source(s)

Supported by an MRC programme grant [G1000902].

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