URDME specifications


Unique identifier OMICS_11479
Software type Framework/Library
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS
Programming languages C, MATLAB, Shell (Bash)
License GNU General Public License version 3.0
Computer skills Advanced
Version 1.2
Stability Stable
Requirements GNU GCC, Comsol Multiphysics
Maintained Yes


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  • person_outline Andreas Hellander <>

Publication for URDME

URDME institution(s)
Department of Computer Science, University of California, Santa Barbara, CA, USA; Department of Information Technology, Uppsala University, Uppsala, Sweden; UPMARC, Uppsala Programming for Multicore Architectures Research Center, Uppsala, Sweden
URDME funding source(s)
The Swedish Graduate School in Mathematics and Computing, the Swedish Research Council and the Linnaeus centre of excellence UPMARC, the Royal Swedish Academy of Sciences FOA08H-109, FOA09H-63, FOA09H-64, SSF grant A3 02:124, U.S. NSF grant DMS-1001012, U.S DOE award DE-FG02-04ER25621, U.S. NSF IGERT DGE-02-21715, Institute for Collaborative Biotechnologies grant W911NF-09-0001 from the U.S. Army Research Office and the National Institute of Biomedial Imaging And Bioengineering of the National Institute of Health under Award Number R01 EB014877

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