USAGP DB

Allows the study of Sense-Antisense (SA) structures and their functions. USAGP DB is organized as a table with attached tracks for search, including different data set source, number of complex SA transcripts (SAT) structures, chromosome span (for plus and minus strands), and pairing type. The database includes a subclass of cis-antisense coding DNA sequence (CDS)/CDS overlapping genes coding for proteins.

USAGP DB specifications

Dataset

Information

Unique identifier	OMICS_27394
Name	USAGP DB
Alternative name	United Sense–Antisense Gene Pairs pipeline DataBase
Restrictions to use	None
Community driven	No
Data access	Browse
User data submission	Not allowed
Maintained	Yes

Maintainers

Vladimir Kuznetsov
Piroon Jenjaroenpun

Publication for United Sense–Antisense Gene Pairs pipeline DataBase

Integrative analysis of the human cis-antisense gene pairs, miRNAs and their transcription regulation patterns

2010 Nucleic Acids Res

PMCID: 2811022

PMID: 19906709

DOI: 10.1093/nar/gkp954

USAGP DB institution(s)

Bioinformatics Institute, Singapore; Genome Institute of Singapore, Singapore

USAGP DB funding source(s)

Supported by Biomedical Research Council of A*STAR (Agency for Science, Technology and Research), Singapore.

USAGP DB reviews

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