VaccImm specifications

Information


Unique identifier OMICS_23538
Name VaccImm
Interface Web user interface
Restrictions to use None
Input data A protein sequence or targeted peptides.
Programming languages C, PHP
Computer skills Basic
Stability Stable
Maintained Yes

Maintainers


  • person_outline Robert Preissner
  • person_outline Joachim von Eichborn

Publication for VaccImm

VaccImm citation

library_books

Development of Immune Specific Interaction Potentials and Their Application in the Multi Agent System VaccImm

2011
PLoS One
PMCID: 3157361
PMID: 21858048
DOI: 10.1371/journal.pone.0023257

[…] ective immune receptor interactions, that are not included in general potentials like the Miyazawa-Jernigan potential.In the second step, the newly developed IPs were applied to the agent-based model VaccImm, an extension of C-ImmSim . There is one other agent-based model that includes the amino acid sequence in calculation; the model of Rapin et al. simulates the immune response against infectio […]

VaccImm institution(s)
Charité – Universitätsmedizin Berlin, Institute for Physiology, Structural Bioinformatics Group, Berlin, Germany; Freie Universitat Berlin, Institut fur Chemie, Berlin, Germany; National Research Council of Italy, Institute for Computing Applications, Rome, Italy
VaccImm funding source(s)
Supported by the international research training group “Genomics and Systems Biology of Molecular Networks” (GRK1360 of the DFG), the research training group “Computational Systems Biology” (GRK1772/1 of the DFG) and by the MedSys programme (BMBF).

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