VanillaICE specifications

Information


Unique identifier OMICS_02070
Name VanillaICE
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
License GNU General Public License version 2.0
Computer skills Advanced
Stability Stable
Maintained Yes

Versioning


No version available

Documentation


Maintainer


  • person_outline Robert B. Scharpf

VanillaICE citation

library_books

Targeting and Regulating of an Oncogene via Nanovector Delivery of MicroRNA using Patient Derived Xenografts

2017
Theranostics
PMCID: 5327642
PMID: 28255359
DOI: 10.7150/thno.16357

[…] ). Raw probe intensity data (CEL Files) obtained from the GeneChip Scanner 3000 system (Affymetrix) were imported to R, segmented using CRLMM algorithm and copy number variantion was estimated by the VanillaICE and DNAcopy methods. […]

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