VarCap specifications

Information


Unique identifier OMICS_19249
Name VarCap
Software type Application/Script
Interface Command line interface
Restrictions to use None
Output data A detailed description of the variants and two files, which give a graphical overview of variant coverage and their frequency distribution.
Output format VCF, PDF
Operating system Unix/Linux
Computer skills Advanced
Version 3.0
Stability Stable
Maintained Yes

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Maintainer


  • person_outline Thomas Rattei <>

Publication for VarCap

VarCap institution(s)
Department of Microbiology and Ecosystems Science, Division of Computational Systems Biology, University of Vienna, Vienna, Austria; Department of Microbiology and Ecosystems Science, Division of Microbial Ecology, University of Vienna, Vienna, Austria; DOE Joint Genome Institute, Lawrence Berkeley National Lab, Walnut Creek, CA, USA
VarCap funding source(s)
Supported by the European Research Council (ERC StG EVOCHLMY, grant no. 281633).

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