VarDetect specifications


Unique identifier OMICS_15081
Name VarDetect
Software type Application/Script
Interface Graphical user interface
Restrictions to use None
Input data A reference sequence
Input format FASTA, XML
Output data List of predicted SNPs
Operating system Unix/Linux, Mac OS, Windows
Programming languages Java
Computer skills Medium
Stability Stable
Requirements JRE
Maintained Yes



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  • person_outline Sissades Tongsima <>

Publication for VarDetect

VarDetect institution(s)
Genome Institute, National Center for Genetic Engineering and Biotechnology, Pathumthani, Thailand; Department of Computer Science, School of Engineering and Technology, Asian Institute of Technology, Pathumthani, Thailand; Division of Medical Genetics, Faculty of Medicine, Siriraj Hospital, Mahidol University, Bangkok, Thailand
VarDetect funding source(s)
This project was supported by Genalys program done by the Centre National de Genotypage (CNG) and the National Center for Genetic Engineering and Biotechnology (BIOTEC). It was also funded by the Thailand Research Fund (TRF) through the Royal Golden Jubilee Ph.D. Program (Grant No. PHD/4.I.MU.45/C.1) and by the Junior Science Talent Program scholarship awarded by the National Science and Technology Development Agency (NSTDA), Thailand.

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