VarDict specifications

Information


Unique identifier OMICS_11609
Name VarDict
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input data VarDict works on Binary Alignment/Map (BAM) files that contain aligned sequence reads against a reference genome.
Operating system Unix/Linux
Programming languages Perl
License MIT License
Computer skills Advanced
Stability Stable
Requirements R, samtools
Maintained Yes

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Documentation


Maintainer


  • person_outline Zhongwu Lai <>

Publication for VarDict

VarDict institution(s)
Oncology iMed, AstraZeneca, Waltham, MA, USA; Oncology iMed, AstraZeneca, Cambridge, UK; Bioinformatics Core, Harvard T.H. Chan School of Public Health, Boston, MA, USA; Wolfson Wohl Cancer Research Centre, Institute of Cancer Sciences, University of Glasgow, Bearsden Glasgow, UK
VarDict funding source(s)
AstraZeneca

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