VarHMM specifications


Unique identifier OMICS_19304
Name VarHMM
Alternative name Variable-order paired HMM
Software type Application/Script
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages C++
License GNU General Public License version 3.0
Computer skills Advanced
Stability Stable
Maintained Yes




No version available


  • person_outline Thomas Poulsen

Publication for Variable-order paired HMM

VarHMM institution(s)
Artificial Intelligence Research Center, National Institute of Advanced Industrial Science and Technology (AIST), Tokyo, Japan; Department of Computational Biology and Medical Sciences, University of Tokyo, Kashiwa, Japan; AIST-Waseda CBBD-OIL, Tokyo, Japan
VarHMM funding source(s)
Supported by Kakenhi grant numbers 26700030 and B. 23300112, as well as AIST internal funding program “LEAD STAR”.

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