VAI specifications

Unique identifier:
OMICS_10984
Interface:
Web user interface
Input data:
The VAI requires variant calls as its input and requires a gene annotation track.
Computer skills:
Basic
Maintained:
Yes
Name:
Variant Annotation Integrator
Restrictions to use:
None
Database management system:
MySQL
Stability:
Stable

VAI specifications

Unique identifier:
OMICS_10984
Software type:
Framework/Library
Restrictions to use:
Academic or non-commercial use
Operating system:
Unix/Linux
Database management system:
MySQL
Stability:
Stable
Name:
Variant Annotation Integrator
Interface:
Command line interface
Input data:
The VAI requires variant calls as its input and requires a gene annotation track.
Programming languages:
C, Javascript
Computer skills:
Advanced
Maintained:
Yes

versioning

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VAI distribution

download

VAI support

Maintainer

  • Angie Hinrichs <>
  • Angie Hinrichs <>

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Credits

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Publications

Institution(s)

Genomics Institute, University of California, Santa Cruz, Santa Cruz, CA, USA; Computational Biology Graduate Group, University of California, Berkeley, Berkeley, CA, USA; Howard Hughes Medical Institute, University of California, Santa Cruz, Santa Cruz, CA, USA

Funding source(s)

This work was funded by the National Human Genome Research Institute (grant U41HG002371-15 to UCSC Center for Genomic Science).

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