VAI specifications

Information


Unique identifier OMICS_10984
Name VAI
Alternative name Variant Annotation Integrator
Interface Web user interface
Restrictions to use None
Input data The VAI requires variant calls as its input and requires a gene annotation track.
Database management system MySQL
Computer skills Basic
Stability Stable
Maintained Yes

Maintainer


  • person_outline Angie Hinrichs <>

Information


Unique identifier OMICS_10984
Name VAI
Alternative name Variant Annotation Integrator
Software type Framework/Library
Interface Command line interface
Restrictions to use Academic or non-commercial use
Input data The VAI requires variant calls as its input and requires a gene annotation track.
Operating system Unix/Linux
Programming languages C, Javascript
Database management system MySQL
Computer skills Advanced
Stability Stable
Maintained Yes

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Maintainer


  • person_outline Angie Hinrichs <>

VAI article

VAI institution(s)
Genomics Institute, University of California, Santa Cruz, Santa Cruz, CA, USA; Computational Biology Graduate Group, University of California, Berkeley, Berkeley, CA, USA; Howard Hughes Medical Institute, University of California, Santa Cruz, Santa Cruz, CA, USA
VAI funding source(s)
This work was funded by the National Human Genome Research Institute (grant U41HG002371-15 to UCSC Center for Genomic Science).

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