VariSNP specifications

Information


Unique identifier OMICS_09636
Name VariSNP
Restrictions to use None
Maintained Yes

Taxon


  • Primates
    • Homo sapiens

Maintainer


  • person_outline Mauno Vihinen

Publication for VariSNP

VariSNP citation

library_books

Mapping genetic variations to three dimensional protein structures to enhance variant interpretation: a proposed framework

2017
Genome Med
PMCID: 5735928
PMID: 29254494
DOI: 10.1186/s13073-017-0509-y

[…] M [], or somatic mutations, such as the Cancer Genome Atlas (TCGA) [] and COSMIC []. Carefully selected benchmark datasets to develop and test prediction methods have been collected: VariBench [] and VariSNP [].Few prediction methods are purely based on 3D structural information, with the exception of FoldX [], which uses an empirical scoring function to predict the change in protein stability or […]

VariSNP institution(s)
Protein Structure and Bioinformatics, Department of Experimental Medical Science, Lund University, Lund, Sweden

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