varSelRF specifications

Unique identifier:
OMICS_14607
Interface:
Command line interface
Input data:
The gene expression data, the class labels.
Operating system:
Unix/Linux
License:
GNU General Public License version 3.0, GNU General Public License version 2.0
Version:
0.7-5
Requirements:
LAM/MPI, randomForest, parallel
Maintained:
Yes
Software type:
Package/Module
Restrictions to use:
None
Output data:
The bootstrapped estimates of prediction error rate, assessments of the stability of the solutions, clickable tables link to additional information for each gene (GO terms, PubMed citations, KEGG pathways).
Programming languages:
Python, R
Computer skills:
Advanced
Stability:
Stable
Source code URL:
https://cran.r-project.org/src/contrib/varSelRF_0.7-8.tar.gz

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varSelRF distribution

download

varSelRF support

Documentation

Maintainer

  • Ramón Diaz-Uriarte <>

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Publications

Institution(s)

Statistical Computing Team, Structural Biology and Biocomputing Programme, Spanish National Cancer Center (CNIO), Madrid, Spain

Funding source(s)

This work was supported by Fundación de Investigación Médica Mutua Madrileña and Project TIC2003-09331-C02-02 of the Spanish Ministry of Education and Science (MEC) and partially supported by the Ramón y Cajal programme of the Spanish MEC.

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