varSelRF specifications

Information


Unique identifier OMICS_14607
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input data The gene expression data, the class labels.
Output data The bootstrapped estimates of prediction error rate, assessments of the stability of the solutions, clickable tables link to additional information for each gene (GO terms, PubMed citations, KEGG pathways).
Operating system Unix/Linux
Programming languages Python, R
License GNU General Public License version 3.0, GNU General Public License version 2.0
Computer skills Advanced
Version 0.7-5
Stability Stable
Requirements LAM/MPI, randomForest, parallel
Source code URL https://cran.r-project.org/src/contrib/varSelRF_0.7-8.tar.gz
Maintained Yes

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Maintainer


  • person_outline Ramón Diaz-Uriarte <>

varSelRF article

varSelRF institution(s)
Statistical Computing Team, Structural Biology and Biocomputing Programme, Spanish National Cancer Center (CNIO), Madrid, Spain
varSelRF funding source(s)
This work was supported by Fundación de Investigación Médica Mutua Madrileña and Project TIC2003-09331-C02-02 of the Spanish Ministry of Education and Science (MEC) and partially supported by the Ramón y Cajal programme of the Spanish MEC.

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