VarSeq pipeline

VarSeq specifications

Information


Unique identifier OMICS_18804
Name VarSeq
Interface Web user interface
Restrictions to use License purchase required
Computer skills Basic
Stability Stable
Free trial Yes
Maintained Yes

Additional information


Access available upon request.

VarSeq citation

2017
PMCID: 5701303

[…] to generate genome variant call format (gvcf). variant filtering and annotation was done using golden helix varseq version 1.1 software (golden helix inc.; http://goldenhelix.com/products/varseq/). the gvcf of each sequenced family member is uploaded to varseq and organized by pedigree. variants are filtered for gq > 20 and dp > 10. of the variants that pass the filter, […]

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