VASCO statistics

info info

Citations per year

Number of citations per year for the bioinformatics software tool VASCO
info

Tool usage distribution map

info info

Associated diseases

info

Popular tool citations

chevron_left Chemical shift prediction chevron_right
Want to access the full stats & trends on this tool?

VASCO specifications

Information


Unique identifier OMICS_15107
Name VASCO
Alternative name Validation of Archived chemical Shifts through atomic Coordinates
Interface Web user interface
Restrictions to use None
Input data A PDB or a BMRB entry identifier.
Output data The protein summary, chemical shift referencing, chemical shift outliers.
Computer skills Basic
Stability Stable
Maintained Yes

Documentation


Maintainer


  • person_outline Wim Vranken

Publications for Validation of Archived chemical Shifts through atomic Coordinates

VASCO citations

 (2)
library_books

Automated NMR resonance assignments and structure determination using a minimal set of 4D spectra

2018
Nat Commun
PMCID: 5786013
PMID: 29374165
DOI: 10.1038/s41467-017-02592-z

[…] distributions would improve 4D-CHAINS performance in addressing the assignment problem. For the different 13C–1H moieties of every amino acid, correlated chemical shifts maps were generated from the VASCO-corrected data. VASCO dataset was chosen instead of the larger BMRB dataset, because chemical shift values of aliphatic carbons that were improperly referenced have been corrected, thus avoiding […]

library_books

Analysis of the structural quality of the CASD NMR 2013 entries

2015
J Biomol NMR
PMCID: 4569653
PMID: 26032236
DOI: 10.1007/s10858-015-9949-0

[…] s et al. ), except where noted. CING integrates the results of a number of external programs, such as WHAT-IF (version 6) (Vriend ), PROCHECK_NMR (Laskowski et al. ), Wattos (Doreleijers et al. ) and VASCO (Rieping and Vranken ), combined with its own internal routines. All analyses were conducted on residues within the well-defined areas of the reference ensembles as determined by CyRange (Table  […]


Want to access the full list of citations?
VASCO institution(s)
Department of Biochemistry, University of Cambridge, Cambridge, UK; Protein Data Bank in Europe, European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK

VASCO reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review VASCO