VaxiJen protocols

VaxiJen specifications

Information


Unique identifier OMICS_12403
Name VaxiJen
Interface Web user interface
Restrictions to use None
Input data Protein sequence
Input format Plain format or fasta
Programming languages Perl
Computer skills Basic
Version 2.0
Stability Stable
Maintained Yes

Maintainer


  • person_outline Irini A. Doytchinova <>

Publication for VaxiJen

VaxiJen IN pipelines

 (2)
2017
PMCID: 5450251
PMID: 28584450
DOI: 10.6026/97320630013094

[…] a prediction that is based on the sequence and features of amino acids and their properties., the identified epitope(s) were used to predict whole protein antigenicity (protective antigen) using vaxijen 2.0 server program with a threshold limit of 0.5 [22]. the threshold values of the highest accuracy of more than 0.5 were considered probable antigens and were selected for further analysis. […]

2017
PMCID: 5602290
PMID: 28943728
DOI: 10.6026/97320630013231

[…] a prediction that is based on the sequence and features of amino acids and their properties., the identified epitope(s) were used to predict whole protein antigenicity (protective antigen) using vaxijen 2.0 server program with a threshold limit of 0.5 [19]. the threshold values of the highest accuracy of more than 0.5 were considered probable antigens and were selected for further analysis., […]

VaxiJen institution(s)
Faculty of Pharmacy, Medical University of Sofia, Sofia, Bulgaria; The Jenner Institute, Oxford University, Compton, Berkshire, UK
VaxiJen funding source(s)
The present study was supported in part by grants from the Royal Society, UK, and the Ministry of Education and Science, Bulgaria.

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