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Vaxjo specifications

Information


Unique identifier OMICS_19930
Name Vaxjo
Restrictions to use None
Database management system MySQL
Community driven No
Data access Browse
User data submission Allowed
Maintained Yes

Additional information


http://www.violinet.org/vaxquery/query_help.php

Publication for Vaxjo

Vaxjo citations

 (3)
library_books

Vaccines Meet Big Data: State of the Art and Future Prospects. From the Classical 3Is (“Isolate–Inactivate–Inject”) Vaccinology 1.0 to Vaccinology 3.0, Vaccinomics, and Beyond: A Historical Overview

2018
PMCID: 5845111
PMID: 29556492
DOI: 10.3389/fpubh.2018.00062

[…] sive steps.Different in silico tools exist, to aid and assist researchers in vaccine discovery and design (, ). Databases of vaccine candidates, such as MalVac (), or Vaxar (), software tools such as Vaxjo (), VIOLIN (–), NERVE (), Vaxign (), Vacceed (), Jenner-predict server (), EpiToolKit (), iVax (), or VaxiJen (), have been specifically implemented for vaccinology to enable prediction of vacci […]

library_books

High Level Fosfomycin Resistance in Vancomycin Resistant Enterococcus faecium

2017
PMCID: 5652432
PMID: 29048285
DOI: 10.3201/eid2311.171130

[…] orted in a recent surveillance study conducted in the United States (). However, the resistance rate would be much higher if we applied the European Committee on Antimicrobial Susceptibility Testing (Växjö, Sweden) breakpoint of <32 μg/mL for susceptible isolates and >32 μg/mL for resistant isolates.The 4 vancomycin-resistant enterococci isolates with MICs >1,024 μg/mL were Enterococcus faecium. W […]

library_books

Genome wide prediction of vaccine targets for human herpes simplex viruses using Vaxign reverse vaccinology

2013
BMC Bioinformatics
PMCID: 3599071
PMID: 23514126
DOI: 10.1186/1471-2105-14-S4-S2

[…] ]. Many of the protective antigens in Protegen come from viruses, thus they can be used for the training of the Vaxign program and the verification of predicted results. The vaccine adjuvant database Vaxjo [] in VIOLIN may provide training data for Vaxign to include a specific component for rational vaccine adjuvant design. The community-based Vaccine Ontology (VO; http://www.violinet.org/vaccineo […]

Citations

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Vaxjo institution(s)
Unit for Laboratory Animal Medicine, University of Michigan Medical School, Ann Arbor, MI, USA; College of Literature, Science, and the Arts, University of Michigan, Ann Arbor, MI, USA; Department of Microbiology & Immunology, University of Michigan Medical School, Ann Arbor, MI, USA; Center for Computational Medicine and Bioinformatics, University of Michigan, Ann Arbor, MI, USA
Vaxjo funding source(s)
Supported by NIH-NIAID Grant R01AI081062.

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