Vaxrank specifications


Unique identifier OMICS_18658
Name Vaxrank
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input data One or more files containing somatic variants, aligned tumor RNA-seq reads, and the HLA alleles to be used for MHC binding prediction.
Input format VCF, MAF, JSON, BAM
Operating system Unix/Linux
Programming languages Python
License Apache License version 2.0
Computer skills Advanced
Stability Stable
Maintained Yes



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  • person_outline Alexander Rubinsteyn <>

Publication for Vaxrank

Vaxrank institution(s)
Department of Genetics and Genomic Sciences at Icahn School of Medicine at Mount Sinai, New York, NY, USA; Department of Microbiology and Immunology, Medical University of South Carolina, Charleston, SC, USA
Vaxrank funding source(s)
Supported by the Icahn Institute and the Parker Institute for Cancer Immunotherapy.

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