Vaxrank specifications

Unique identifier:
OMICS_18658
Interface:
Command line interface
Input data:
One or more files containing somatic variants, aligned tumor RNA-seq reads, and the HLA alleles to be used for MHC binding prediction.
Operating system:
Unix/Linux
License:
Apache License version 2.0
Stability:
Stable
Software type:
Package/Module
Restrictions to use:
None
Input format:
VCF, MAF, JSON, BAM
Programming languages:
Python
Computer skills:
Advanced
Maintained:
Yes

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Vaxrank distribution

download

Vaxrank support

Maintainer

  • Alexander Rubinsteyn <>

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Publications

Institution(s)

Department of Genetics and Genomic Sciences at Icahn School of Medicine at Mount Sinai, New York, NY, USA; Department of Microbiology and Immunology, Medical University of South Carolina, Charleston, SC, USA

Funding source(s)

Supported by the Icahn Institute and the Parker Institute for Cancer Immunotherapy.

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