vConTACT specifications

Information


Unique identifier OMICS_22173
Name vConTACT
Alternative name Viral CONTigs Automatic Clustering and Taxonomy
Software type Application/Script
Interface Command line interface
Restrictions to use None
Input data Some viral sequences.
Input format CSV
Operating system Unix/Linux
Programming languages Python
License GNU General Public License version 3.0
Computer skills Advanced
Requirements Numpy, Scipy, Biopython, Pandas
Maintained No

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Publication for Viral CONTigs Automatic Clustering and Taxonomy

vConTACT institution(s)
Department of Microbiology, Ohio State University, Columbus, OH, USA; Institut de Biologie de l’ENS (IBENS), École normale supérieure, PSL Research University, Paris, France; ESPCI, PSL Research University, Paris, France; Department of Chemistry and Biochemistry, Ohio State University, Columbus, OH, USA; Department of Civil, Environmental and Geodetic Engineering, Ohio State University, Columbus, OH, USA
vConTACT funding source(s)
Supported by awards from the US Department of Energy, Office of Science, Office of Biological and Environmental Research under the Genomic Science program (DE-SC0010580), the National Science Foundation (OCE-1536989), and the Gordon and Betty Moore Foundation (#3790, 3305) and computational resources provided by the Ohio Supercomputer Center (1987).

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