Provides immunology researchers with powerful data analysis infrastructure. VDJserver offers tools for performing immune repertoire analysis with a focus on collaboration, streamlined metadata capture, and reproducibility. It also allow to get basic repertoire characterization results for both B cell receptor and T cell receptor repertoires.

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VDJServer classification

  • Animals
    • Homo sapiens
    • Mus musculus

VDJServer specifications

Software type:
Suite
Restrictions to use:
None
Programming languages:
C++, Java, Javascript, Python
Version:
0.11.0
Source code URL:
http://wiki.vdjserver.org/vdjserver/index.php/VDJServer_Software_Versions
Interface:
Web user interface
Operating system:
Unix/Linux, Mac OS, Windows
Computer skills:
Basic
Stability:
Stable

VDJServer support

Documentation

Additional information

http://wiki.vdjserver.org/vdjserver/index.php/VDJServer_Wiki

Credits

Institution(s)

The University of Texas Southwestern Medical Center, Dallas, TX, USA; The Texas Advanced Computing Center, University of Texas, Austin, TX, USA; The J. Craig Venter Institute, San Diego, CA, USA, The University of California, San Diego, CA, USA

Funding source(s)

Funded by a National Institute of Allergy and Infectious Diseases research grant (#1R01A1097403)

Investigator(s)

Scott Christley, John Fonner, Christopher Jordan, Siva Kulasekaran, Stephen Mock, Nancy Monson, Manuel Rojas, William Rounds, Walter Scarborough, Richard H. Scheuermann, Inimary T. Toby, and Lindsay G. Cowell

Developer(s)

Scott Christley, Jared Ostmeyer, Inimary Toby

Link to literature

By using OMICtools you acknowledge that you have read and accepted the terms of the end user license agreement.