A complementary software suite that solves a wide range of RepSeq post-analysis tasks, provides a detailed tabular output and publication-ready graphics, and is built on top of a flexible API. The main aims of the VDJtools Project are: (i) Ensure consistency between post-analysis methods and results, (ii) Save the time of bioinformaticians analyzing RepSeq data, (iii) Create an API framework facilitating development of new RepSeq analysis applications, and (iv) Provide a simple enough command line tool so it could be used by immunologists and biologists with little computational background.
