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Vector NTI Advance specifications

Information


Unique identifier OMICS_29040
Name Vector NTI Advance
Software type Toolkit/Suite
Interface Graphical user interface
Restrictions to use License purchase required
Operating system Mac OS, Windows
License Commercial
Computer skills Medium
Version 11.5.4
Stability Stable
Free trial Yes
Maintained Yes

Subtools


  • ALignX
  • BioAnnotator
  • Clone2Seq
  • ContigExpress
  • GenomBench
  • ReGENerator
  • Vector NTI
  • VectorSelector

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Vector NTI Advance citations

 (854)
library_books

Molecular Characterization of SQUAMOSA PROMOTER BINDING PROTEIN LIKE (SPL) Gene Family in Betula luminifera

2018
Front Plant Sci
PMCID: 5945835
PMID: 29780401
DOI: 10.3389/fpls.2018.00608

[…] Multiple sequences alignment of SPL proteins was performed using AlignX to obtain SBP domain sequences. Phylogenetic analysis was carried out by the neighbor-joining (NJ) method in MEGA 7.0 with 1,000 bootstrap replicates (Kumar et al., ). […]

library_books

Survey and evaluation of mutations in the human KLF1 transcription unit

2018
Sci Rep
PMCID: 5920080
PMID: 29700354
DOI: 10.1038/s41598-018-24962-3

[…] tinuous variables satisfying the normality assumption, a two-tailed unpaired t test was used.Discovery of any nucleotide change(s) followed alignment to the GRCh38 reference sequence using Vector NTI ContigExpress software (ThermoFisher Scientific). SNPs and any associated parameters were identified from the 1000 Genomes databases,,. Other datasets queried included BloodSpot, cBioPortal, GGV, UK10 […]

call_split

CD81 Receptor Regions outside the Large Extracellular Loop Determine Hepatitis C Virus Entry into Hepatoma Cells

2018
Viruses
PMCID: 5923501
PMID: 29677132
DOI: 10.3390/v10040207
call_split See protocol

[…] is according to Kyte–Doolittle was performed using CLC Genomics Workbench (Qiagen, Hilden, Germany). The hCD81 structure (PDB:5TCX) was imaged with 3-D Molecule Viewer (Invitrogen, Carlsbad, CA, USA, Vector NTI Advance 11.0). Exponential growth regression analysis to correlate sequence identity and susceptibility as well as linear regression analysis of tetraspanin surface expression and HCV susce […]

library_books

Isolation and characterization of an astrovirus causing fatal visceral gout in domestic goslings

2018
PMCID: 5908792
PMID: 29674726
DOI: 10.1038/s41426-018-0074-5

[…] viral genome were amplified using the 5′/3′ RACE kit (Clontech, CA, USA) following the guidelines of the manufacturer. The initial complete genome was assembled and manually edited using the Software ContigExpress. Based on the initial genome sequence, additional primer pairs were designed (Table ), and PCR amplicons were sequenced to determine the genome.To evaluate the potential adaptive mutatio […]

library_books

Insight into the cold adaptation and hemicellulose utilization of Cladosporium neopsychrotolerans from genome analysis and biochemical characterization

2018
Sci Rep
PMCID: 5904165
PMID: 29666397
DOI: 10.1038/s41598-018-24443-7

[…] adapted strategies. Homology modeling of Xyn10A, Xyn11A and Xyl43A was conducted by using the Swiss-modeler (https://swissmodel.expasy.org/interactive). The amino acid composition was analyzed by the Vector NTI Advance v10.0 software. PIC (http://pic.mbu.iisc.ernet.in/) and VADAR v1.8 (http://vadar.wishartlab.com/) were used to calculate the protein interactions and ASA. […]

library_books

Sex specific differences in the occurrence of Fusobacterium nucleatum subspecies and Fusobacterium periodonticum in the oral cavity

2018
Oncotarget
PMCID: 5945502
PMID: 29755677
DOI: 10.18632/oncotarget.25042

[…] 8 for males, which were not statistically different. Table and summarize the sequence read statistics for all groups. Raw sequences were quality checked manually using the sequence editing software Vector NTI Advance 9.0. Sequence alignment was performed with the multiple sequence alignment program MAFFT (Multiple Alignment using Fast Fourier Transform) []. The assignment of sequences to FN subs […]

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Vector NTI Advance institution(s)
ThermoFisher Scientific

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