Velvet specifications

Information


Unique identifier OMICS_00038
Name Velvet
Software type Package/Module
Interface Command line interface
Restrictions to use None
Biological technology Illumina, Life Technologies, Roche
Operating system Unix/Linux
License GNU General Public License version 2.0
Computer skills Advanced
Version 1.2.10
Stability Stable
Maintained Yes

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Velvet articles

Velvet citation

2012
PMCID: 3417556

[…] numbers srp001790 and sra010929, respectively (lefébure et al., 2010)., illumina traces from 80 of the c. jejuni and c. coli genomes sequenced by lefébure et al. (2010) were assembled using velvet (version 1.1.06; zerbino and birney, 2008) using a hash length of 25 as this was found to give optimal assemblies. the order of the contigs was inferred by comparison with the c. jejuni nctc […]

Velvet institution(s)
European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK; Genome Technology Branch, National Human Genome Research Institute, National Institutes of Health, Bethesda, MD, USA
Velvet funding source(s)
This work was supported by European Molecular Biology Laboratory’s central funds, and the Intramural Research Program of the National Human Genome Research Institute.

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