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Venn diagram generation software tools | Gene expression data analysis

Venn diagrams are commonly used to display list comparison. In biology, they are widely used to show the differences between gene lists originating from different differential analyses, for instance. They thus allow the comparison between different…
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VennDIS
Desktop

VennDIS Venn Diagram Interactive Software

Produces highly customizable, publication quality Venn and Euler figures with a…

Produces highly customizable, publication quality Venn and Euler figures with a simple and intuitive graphical user interface (GUI). VennDIS is a platform-independent open source software written in…

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InteractiVenn
Web

InteractiVenn

A more flexible tool for interacting with Venn diagrams including up to six…

A more flexible tool for interacting with Venn diagrams including up to six sets. InteractiVenn offers a clean interface for Venn diagram construction and enables analysis of set unions while…

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VENNY
Web

VENNY

Allows comparison of lists with Venn Diagrams. VENNY is a web-server,…

Allows comparison of lists with Venn Diagrams. VENNY is a web-server, consisting in a single standard html file that can be used off-line.

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jvenn
Web

jvenn

A plug-in for the jQuery Javascript library. Jvenn hanldes up to six classes…

A plug-in for the jQuery Javascript library. Jvenn hanldes up to six classes venn diagram and is easily integrable within web sites. It allows to display Edwards-Venn diagram and to provide the data…

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BioVenn
Web

BioVenn

Allows users to compare and visualize biological lists using Venn diagrams.…

Allows users to compare and visualize biological lists using Venn diagrams. BioVenn is a web application that generates circular area-proportional Venn diagrams from lists of biological identifiers.…

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Venn diagram
Web

Venn diagram

With this tool you can calculate the intersection(s) of list of elements. It…

With this tool you can calculate the intersection(s) of list of elements. It will generate a textual output indicating which elements are in each intersection or are unique to a certain list. If the…

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eulerAPE
Desktop

eulerAPE

Draws area-proportional 3-Venn diagrams using ellipses. eulerAPE is an…

Draws area-proportional 3-Venn diagrams using ellipses. eulerAPE is an automated method that generates an exact diagram for most of the cases, and when it fails, the best diagram obtained through the…

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CanvasXpress
Desktop

CanvasXpress

Enables creation of visualizations. CanvasXpress is a standalone JavaScript…

Enables creation of visualizations. CanvasXpress is a standalone JavaScript library for reproducible research with complete tracking of data and end-user modifications, which supports a large number…

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VennDiagramWeb
Web
Desktop

VennDiagramWeb

Provides a way to integrate and optimize R code for data-visualization with…

Provides a way to integrate and optimize R code for data-visualization with web-based real-time manual optimization with computational pipelines. VennDiagramWeb facilitates the creation of both Venn…

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venneuler
Desktop

venneuler

Provides a statistical basis for estimating area-proportional circular Venn and…

Provides a statistical basis for estimating area-proportional circular Venn and Euler diagrams on real data. Venneuler is an algorithm that produces (i) a circular Venn diagram when the data can be…

OrthoVenn
Web

OrthoVenn

A web platform for comparison and annotation of orthologous gene clusters among…

A web platform for comparison and annotation of orthologous gene clusters among multiple species. OrthoVenn provides comprehensive coverage of vertebrates, metazoa, protists, fungi, plants and…

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AnyExpress
Desktop

AnyExpress

Combines cross-platform gene expression data using a fast interval-matching…

Combines cross-platform gene expression data using a fast interval-matching algorithm. AnyExpress is a toolkit that can combine cross-platform gene expression data, process data from both open- and…

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VennDiagram
Desktop

VennDiagram

Offers the user the ability to customize essentially all aspects of the…

Offers the user the ability to customize essentially all aspects of the generated diagrams, including font sizes, label styles and locations, and the overall rotation of the diagram.

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VennMaster
Desktop

VennMaster

Provides an alternative visualization approach with area-proportional Euler…

Provides an alternative visualization approach with area-proportional Euler diagrams. VennMaster was integrated into the GoMiner software. That integration provides a seamless interface for user, and…

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VennBLAST
Desktop

VennBLAST

A set of high-performance utilities that combines fast parallelized BLAST…

A set of high-performance utilities that combines fast parallelized BLAST filtering with a visualization tool for whole-transcriptomic alignment comparison using Venn diagrams. The software…

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gplots
Desktop

gplots

Allows users to plot data. gplots gathers a wide range of functionalities which…

Allows users to plot data. gplots gathers a wide range of functionalities which permit, for instance, to calculate and plot locally summary function, manipulate colors, display Open Office style…

UpSet
Web
Desktop

UpSet

Enables to investigate set-based data. UpSet is a visualization technique for…

Enables to investigate set-based data. UpSet is a visualization technique for the quantitative analysis of sets, their intersections, and aggregates of intersections. User can visualize set…

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CoVennTree
Web

CoVennTree Comparative weighted Venn Tree

Simultaneously compares up to three multifarious datasets by aggregating and…

Simultaneously compares up to three multifarious datasets by aggregating and propagating information from the bottom to the top level and produces a graphical output in Cytoscape. The underlying…

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linear_Venn_dia…
Desktop

linear_Venn_diagram

Creates an illustration of the relationships between populations, groups of…

Creates an illustration of the relationships between populations, groups of objects with something in common.

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Vennerable
Desktop

Vennerable

Offers Venn diagrams. Vennerable allows the display of area-weighted Venn…

Offers Venn diagrams. Vennerable allows the display of area-weighted Venn diagrams and allows fine graphical control over the result.

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Venn Diagram…
Desktop

Venn Diagram Plotter

This program can draw correctly proportioned and positioned Venn diagrams,…

This program can draw correctly proportioned and positioned Venn diagrams, supporting both two-circle and three-circle Venn diagrams (though the overlap regions of three-circle Venn diagrams are not…

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DrawVenn
Desktop

DrawVenn

A program that generates area-proportional 2-Venn diagrams using circles and…

A program that generates area-proportional 2-Venn diagrams using circles and area-proportional 3-Venn diagrams using rectangles.

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GeneVenn
Web

GeneVenn

Creates Venn diagrams from two or three gene lists. GeneVenn is a web…

Creates Venn diagrams from two or three gene lists. GeneVenn is a web application that generates Venn diagrams with hyperlinks, on each area on the diagram, showing the related gene list. Each gene…

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Pangloss Venn…
Web

Pangloss Venn diagram generator

Paste in four lists, and this utility will tell you what they have in common,…

Paste in four lists, and this utility will tell you what they have in common, and will draw a little Venn diagram illustrating the intersections of the lists.

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Vennt
Web
Desktop

Vennt

Allows users to create Venn diagrams by using a gene-list outputted from a…

Allows users to create Venn diagrams by using a gene-list outputted from a differential expression analysis. Vennt is available both as a web application and as a software that can be installed on a…

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VENNTURE
Desktop

VENNTURE

A Venn diagram generating tool that can accommodate the input of up to 6…

A Venn diagram generating tool that can accommodate the input of up to 6 distinct data sets from an excel spreadsheet.

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