VennMaster protocols

VennMaster specifications

Information


Unique identifier OMICS_05569
Name VennMaster
Software type Application/Script, Package/Module
Interface Command line interface, Graphical user interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages Java
Computer skills Advanced
Version 0.37.3
Stability Stable
Requirements JRE
Maintained Yes

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Documentation


Maintainers


  • person_outline Hans Kestler <>
  • person_outline John Weinstein <>
  • person_outline André Müller <>
  • person_outline Johann Kraus <>
  • person_outline Malte Buchholz <>

Publication for VennMaster

VennMaster IN pipeline

2012
PMCID: 3280880
PMID: 22249449
DOI: 10.1084/jem.20111980

[…] were used. mutation frequencies were calculated as the number of mutations divided by the number of all nucleotides of the given frame work regions and cdrs. venn diagrams were generated with vennmaster 0.37.4 (2010-04-06). for phylogenetic analysis, sequences were aligned with clustalw 2.0.12 multiple sequence alignment tool (larkin et al., 2007; goujon et al., 2010). based […]

VennMaster institution(s)
Neural Information Processing, University of Ulm, Germany; Internal Medicine I – Gastroenterology, University Hospital Ulm, Germany; Department of Gastroenterology and Endocrinology, University Hospital of Marburg, Germany; Georgetown University, Washington, WA, USA; SRA International, USA; National Institutes of Health, National Cancer Institute, Laboratory of Molecular Pharmacology, Genomics and Bioinformatics Group, USA
VennMaster funding source(s)
Supported by the Intramural Research Program of the NIH, National Cancer Institute, Center for Cancer Research.

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