VENNTURE protocols

View VENNTURE computational protocol

VENNTURE statistics

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Associated diseases

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VENNTURE specifications

Information


Unique identifier OMICS_05563
Name VENNTURE
Software type Application/Script, Package/Module
Interface Graphical user interface
Restrictions to use None
Input format XLS
Output format XLS
Operating system Unix/Linux, Windows
Programming languages C++
Computer skills Medium
Stability Stable
Maintained Yes

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  • person_outline Stuart Maudsley <>

Publication for VENNTURE

VENNTURE in pipeline

2013
PMCID: 3806867
PMID: 24194875
DOI: 10.1371/journal.pone.0077232

[…] of the gene expression data was done using the pvclust r-package using correlation as the distance parameter and averaging as the clustering method []. ingenuity pathway analysis (ipa) and vennture [] programs were used for the data analysis., the data were analyzed and visualized using standard and custom algorithms implemented in the r/bioconductor framework for statistical computing […]


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VENNTURE in publications

 (11)
PMCID: 5542436
PMID: 28771547
DOI: 10.1371/journal.pone.0182302

[…] system (bio-rad, usa)., the isolates showing antagonistic activity against the different fungal pathogens were represented as venn diagram using the multiple dataset analysis features of vennture software []. the shannon-wiener diversity index (h) along with the evenness index (e) was calculated []. the means and standard deviations of the data were calculated. analysis of variance […]

PMCID: 5349546
PMID: 28290512
DOI: 10.1038/srep44406

[…] at least once. statistical analyses such as principal components analysis (pca) and analysis of similarity (anosim) were performed using past 2.7c software. multiple dataset analysis feature of vennture was used to study the distribution of compounds from the gc-ms profiles by venn analysis. metaboanalyst package, customized for metabolomics, was used for fold change analysis, […]

PMCID: 4703971
PMID: 26739748
DOI: 10.1038/srep18919

[…] the distribution of ssrs in genic and intergenic regions was determined based on the information of genome sequence annotations available from ncbi genbank. the venn diagram investigational tool vennture was adopted to identify the species-specific ssr motifs., a homemade workflow was applied to identify the unique ssr loci in zunla-1 genome due to the high percentage (80.90%) of repetitive […]

PMCID: 4826182
PMID: 26678033
DOI: 10.18632/oncotarget.6600

[…] identification of significantly modulated genes was carried out by brb array tools (vers 4.3.0) developed by dr. richard simon and amy peng lam. generation of edwards-venn diagrams was obtained by vennture software []. downstream effects analysis and canonical pathway analysis were performed by ingenuity pathway analysis, ipa 8.5 (www.ingenuity.com) as described []., c-fos (hs99999140-m1), […]

PMCID: 4639606
PMID: 26617590
DOI: 10.3389/fmicb.2015.01252

[…] leaves were compared with the uninoculated control plants., the total isolates producing different pgp traits profile is represented as venn diagram using the multiple dataset analysis feature of vennture software (). plant growth promoting experiment of three different tea clones were conducted in a completely randomized design. the principal component analysis (pca, is calculated based […]


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VENNTURE institution(s)
Metabolism Unit, Laboratory of Clinical Investigation, National Institute on Aging, National Institutes of Health, Baltimore, MD, USA; Receptor Pharmacology Unit, Laboratory of Neuroscience, National Institute on Aging, National Institutes of Health, Baltimore, MD, USA; Diabetes Section, Laboratory of Clinical Investigation, National Institute on Aging, National Institutes of Health, Baltimore, MD, USA; Gene Expression and Genomics Unit, Research Resources Branch, National Institute on Aging, National Institutes of Health, Baltimore, MD, USA
VENNTURE funding source(s)
Supported entirely by the Intramural Program of the National Institute on Aging, National Institutes of Health.

VENNTURE review

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pallavi singh's avatar image No country

pallavi singh

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please anyone help how to get the VENNTURE software, i could not find a link for access to the software.