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Protocols

VENNTURE specifications

Information


Unique identifier OMICS_05563
Name VENNTURE
Software type Application/Script, Package/Module
Interface Graphical user interface
Restrictions to use None
Input format XLS
Output format XLS
Operating system Unix/Linux, Windows
Programming languages C++
Computer skills Medium
Stability Stable
Maintained Yes

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Maintainer


  • person_outline Stuart Maudsley

Publication for VENNTURE

VENNTURE citations

 (8)
library_books

Evaluation of multifarious plant growth promoting traits, antagonistic potential and phylogenetic affiliation of rhizobacteria associated with commercial tea plants grown in Darjeeling, India

2017
PLoS One
PMCID: 5542436
PMID: 28771547
DOI: 10.1371/journal.pone.0182302

[…] The isolates showing antagonistic activity against the different fungal pathogens were represented as Venn diagram using the multiple dataset analysis features of Vennture software []. The Shannon-Wiener diversity index (H) along with the evenness index (E) was calculated []. The means and standard deviations of the data were calculated. Analysis of variance (A […]

library_books

VennPainter: A Tool for the Comparison and Identification of Candidate Genes Based on Venn Diagrams

2016
PLoS One
PMCID: 4847855
PMID: 27120465
DOI: 10.1371/journal.pone.0154315

[…] ed data points. Powerful VennDiagram [] generates Venn and Euler diagrams in R and it provides a large number of customizable features. Unfortunately, its command-line operation is not user-friendly. VennTure [] can generate six-sets Venn diagrams with a graphic user interface (GUI), yet it consumes large amounts of memory and has low computational efficiency. Venny [], BioVenn [], GeneVenn [], an […]

library_books

A comprehensive characterization of simple sequence repeats in pepper genomes provides valuable resources for marker development in Capsicum

2016
Sci Rep
PMCID: 4703971
PMID: 26739748
DOI: 10.1038/srep18919

[…] RAW. The distribution of SSRs in genic and intergenic regions was determined based on the information of genome sequence annotations available from NCBI GenBank. The Venn diagram investigational tool VENNTURE was adopted to identify the species-specific SSR motifs. […]

library_books

Assessment of Culturable Tea Rhizobacteria Isolated from Tea Estates of Assam, India for Growth Promotion in Commercial Tea Cultivars

2015
Front Microbiol
PMCID: 4639606
PMID: 26617590
DOI: 10.3389/fmicb.2015.01252

[…] The total isolates producing different PGP traits profile is represented as Venn diagram using the multiple dataset analysis feature of Vennture software (). Plant growth promoting experiment of three different tea clones were conducted in a completely randomized design. The principal component analysis (PCA, is calculated based on ei […]

call_split

Shoot bending promotes flower bud formation by miRNA‐mediated regulation in apple (Malus domestica Borkh.)

2015
Plant Biotechnol J
PMCID: 4755197
PMID: 26133232
DOI: 10.1111/pbi.12425
call_split See protocol

[…] Differentially expressed known and novel miRNAs were analysed using Venn diagrams (Martin et al., ) with the VENNTURE software (http://www.irp.nia.nih.gov/branches/lci/nia_bioinformatics_software.html). In addition, we analysed the known and novel miRNAs’ expression profiles over time, as well as between con […]

library_books

Comparative Meta Analysis of Transcriptomics Data during Cellular Senescence and In Vivo Tissue Ageing

2015
PMCID: 4419258
PMID: 25977747
DOI: 10.1155/2015/732914

[…] an Diego, CA USA). Venn diagram analyses for comparison between two and four datasets were implemented with the BioInfoRX Venn diagram plotter (http://bioinforx.com/free/bxarrays/venndiagram.php) and VENNTURE software [], respectively. […]


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VENNTURE institution(s)
Metabolism Unit, Laboratory of Clinical Investigation, National Institute on Aging, National Institutes of Health, Baltimore, MD, USA; Receptor Pharmacology Unit, Laboratory of Neuroscience, National Institute on Aging, National Institutes of Health, Baltimore, MD, USA; Diabetes Section, Laboratory of Clinical Investigation, National Institute on Aging, National Institutes of Health, Baltimore, MD, USA; Gene Expression and Genomics Unit, Research Resources Branch, National Institute on Aging, National Institutes of Health, Baltimore, MD, USA
VENNTURE funding source(s)
Supported entirely by the Intramural Program of the National Institute on Aging, National Institutes of Health.

VENNTURE review

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pallavi singh's avatar image No country

pallavi singh

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please anyone help how to get the VENNTURE software, i could not find a link for access to the software.