|Interface||Web user interface|
|Restrictions to use||None|
|Input data||Some lists (up to four).|
- person_outline Juan Carlos Oliveros <>
#1 opened on 2015-12-24 by Arnaud Desfeux • 23 answers
Website is not available.. anyone know if this is gone forever? It was really incredibly useful for quick and dirty comparisons.
Is this website nos availabe anymore?
abhishek singh chauhan
venny site is not opening.
Venny still not opening as a webpage - bug or removal of program?
your website lin is not working
I cann acces: The requested URL could not be retrieved The following error was encountered while trying to retrieve the URL: http://bioinfogp.cnb.csic.es/tools/venny/venny.php Connection to 126.96.36.199 failed. The system returned: (113) No route to host
Can't connect to the server
Hi, Venny website doesn't seem to work. Any advise? Thanks
A better alternative, and is a local version with much more customization. http://kislingerlab.uhnres.utoronto.ca/projects/VennDIS_v1.0.zip
Hello, I have used Venny a lot in the past but for some reason cannot get the link to work today. Anyone know how to solve this. Audra
A fire brought down CNB server last Saturday. They are working on getting the server to work again. I'll guess it will get back to normal in afew days
its not working, i already presented venn diagram made by this program and i need to make few modifications in that.
Hi, Venny is working again. The server is now connected to a provisional source and new power outages are expected in these days. We regret all inconveniences caused. Regards, OLI
I'm glad no one was hurt in the fire! Thankful to have this great tool back and running.
it seems not to be working again! help!!
Maria, It is working now for me... maybe a brief network interruption? To avoid further network problems, Venny 2.0 can be used locally (off-line). Just click at "Please cite" link and follow the instructions. It is very, very easy. Regards, OLI
I used Venny a few weeks ago (very nice indeed) but now the URL seems not to be available anymore "The requested URL /tools/venny/venny.php was not found on this server."
Vincent J Henry
@Pascal Maybe it was a month ago... It is working now, moreover an off-line version is available.
Pascal, use "index.html" instead "venny.php". Regards, OLI
Unfortunately, the venny page will not load.
Venny site will not come up.
May anybody tell me how to add a List of gene to the default 4 ones? i would need to compare 5 lists of gene and until now I could only compare 4.Thank you!
[…] a neighborhood radius of 5, minimum neighborhood quality of 15 and minimum central quality of 20, a minimum coverage of 3 and a 20% of minimum variant frequency., the snps were classified using venny 2.1 tool  as: 1) snps identified in genes located in common regions observed in all the backcrosses, and 2) snps segregating in the backcross where backcross-specific qtl regions […]
[…] doxlipo and dppc doxlipo treatment showed fewer differentially expressed genes. the venn diagram was used to demonstrate the differentially expressed genes in common to different treatments using venny 2.1. of these, 11 upregulated and 16 downregulated genes were common to all treatments with a fold change of >1.5 (figure 5b). the heatmap of the differentially expressed genes was graphed […]
[…] hochberg method. the threshold for significantly differential expression was used a set of corrected p value of 0.005 and log2(fold change) of 1. venn diagrams were created using an online tool, venny 2.1.0 (http://bioinfogp.cnb.csic.es/tools/venny/index.html) . gene ontology (go) enrichment was performed by the goseq r package . kyoto encyclopedia of genes and genomes (kegg) […]
[…] and count value were calculated using express (mortazavi et al., 2008). differential expression analysis was performed using the deseq r package. p<0.05 was set as the threshold for significance. venny and gene ontology (go) analysis were performed by venny 2.1 (http://bioinfogp.cnb.csic.es/tools/venny/) and wego (web gene ontology annotation plot; […]
[…] http://support.illumina.com/sequencing/sequencing_software/igenome.html , http://www.biocomputing.it/fidea , http://www-huber.embl.de/users/anders/htseq/ , http://bioinfogp.cnb.csic.es/tools/venny/index.html , http://www.informatics.jax.org/ , the supplementary material for this article can be found online at: […]