Veridical protocols

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description
Veridical computational protocol

Veridical specifications

Information


Unique identifier OMICS_02630
Name Veridical
Software type Package/Module
Interface Command line interface
Restrictions to use License purchase required
Operating system Unix/Linux, Mac OS
Programming languages C++
License Commercial
Computer skills Advanced
Maintained Yes

Versioning


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Maintainers


  • person_outline Veridical Team <>
  • person_outline Peter Rogan <>

Additional information


This tool is integrated into the MutationForecaster software.

Publication for Veridical

Veridical IN pipeline

2014
PMCID: 4231324
PMID: 25394353
DOI: 10.1038/srep07063

[…] coverage, resulting from either low expression in the breast tumours carrying the mutation50, tissue-specificity of gene expression, or transcript instability from nonsense-mediated decay. although veridical provided experimental validation of predicted splicing mutations, the impact of these and protein coding mutations on tumour progression and biology could not be determined from the present […]

Veridical institution(s)
Department of Computer Science, University of Western Ontario, London, ON, Canada; Department of Biochemistry, University of Western Ontario, London, ON, Canada; Cytognomix, Inc., London, ON, Canada
Veridical funding source(s)
Supported by the Canadian Breast Cancer Foundation, Canadian Foundation for Innovation, Canada Research Chairs Secretariat and the Natural Sciences and Engineering Research Council of Canada (NSERC Discovery Grant 371758-2009); by fellowships from the Ontario Graduate Scholarship Program, the Pamela Greenaway-Kohlmeier Translational Breast Cancer Research Unit, the CIHR Strategic Training Program in Cancer Research and Technology Transfer, and the University of Western Ontario.

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