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Veridical specifications
Information
| Unique identifier | OMICS_02630 |
|---|---|
| Name | Veridical |
| Software type | Package/Module |
| Interface | Command line interface |
| Restrictions to use | License purchase required |
| Operating system | Unix/Linux, Mac OS |
| Programming languages | C++ |
| License | Commercial |
| Computer skills | Advanced |
| Maintained | Yes |
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Maintainers
- person_outline Veridical Team <>
- person_outline Peter Rogan <>
Additional information
Publication for Veridical
Validation of predicted mRNA splicing mutations using high-throughput transcriptome data.
Veridical in pipeline
[…] coverage, resulting from either low expression in the breast tumours carrying the mutation, tissue-specificity of gene expression, or transcript instability from nonsense-mediated decay. although veridical provided experimental validation of predicted splicing mutations, the impact of these and protein coding mutations on tumour progression and biology could not be determined from the present […]
Veridical in publication
Splicing mutation analysis reveals previously unrecognized pathways in lymph node invasive breast cancer
[…] identified arid1a as significantly mutated, concordant with an independent, large-scale, breast cancer genomics study., changes in mrna splicing from the predicted mutations were validated with veridical, which corroborates predicted, aberrant splice isoforms by assessing mutation-derived sequence reads in tumour rna relative to their abundance in controls lacking the mutation. controls […]
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