ViDaExpert statistics

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Associated diseases

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ViDaExpert specifications

Information


Unique identifier OMICS_25272
Name ViDaExpert
Software type Toolkit/Suite
Interface Graphical user interface
Restrictions to use None
Input format DAT
Operating system Windows
Computer skills Medium
Version 1.2
Stability Stable
Maintained Yes

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Documentation


Maintainers


  • person_outline Andrei Zinovyev <>
  • person_outline Pitenko Alexander <>

Additional information


http://www.ihes.fr/~zinovyev/vida/ViDaExpert/DataSetWork.pdf http://www.ihes.fr/~zinovyev/vida/ViDaExpert/DataVisualization.pdf http://www.ihes.fr/~zinovyev/vida/ViDaExpert/DataAnalysis.pdf

Publication for ViDaExpert

ViDaExpert in publication

PMCID: 4631357
PMID: 26528548
DOI: 10.1371/journal.pcbi.1004571

[…] non-linear principal manifold was constructed for the distribution of all single and double mutants of the model in the space of computed model phenotype probabilities, using elastic maps method and vidaexpert software [–]. we preferred using a non-linear version of principal component analysis (pca) for data visualisation in this case, because it is known to better preserve the local […]


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ViDaExpert institution(s)
University of Leicester, Leicester, UK; Institute of Computational Modeling, Siberian Brand of the Russian Academy of Sciences, Krasnoyarsk, Russia; Institut Curie, Paris, France; INSERM U900, Paris, France; Mines Paris Tech, Fontainebleau, France

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