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Citations per year

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Associated diseases

Associated diseases

viGEN specifications


Unique identifier OMICS_14885
Name viGEN
Software type Pipeline/Workflow
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS
Programming languages R, Shell (Bash)
Computer skills Advanced
Stability Stable
Maintained Yes



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Publication for viGEN


Detection and quantification of viral RNA in human tumors using open source pipeline: viGEN.

2017 BioRxiv
DOI: 10.1101/099788

viGEN in publications

PMCID: 5924961
PMID: 29706034
DOI: 10.5534/wjmh.17050

[…] due to chance alone” []., in early 2014, two published articles had gained media attention after they reported that patients who received tth were at an increased risk of developing cv disease []. vigen et al [] published a retrospective national cohort study of 8,709 men with a total t level lower than 300 ng/dl who had undergone coronary angiography within the veterans administration (va) […]

PMCID: 5596409
DOI: 10.1186/s40644-017-0126-4

[…] , 1. thian yl, riddell am, koh d-m. liver-specific agents for contrast-enhanced mri: role in oncological imaging. cancer imaging. 2013;13(4):567-579., 2. frydrychowicz a, nagle sk, d’souza sl, vigen kk, reeder sb. optimized high-resolution contrast-enhanced hepatobiliary imaging at 3t: a cross-over comparison of gadobenate dimeglumine and gadoxetic acid. journal of magnetic resonance […]

PMCID: 5555892
PMID: 28778993
DOI: 10.14814/phy2.13366

[…] secretion in adults (knopf et al. ; chromiak and antonio ). however, studies investigating the effect of amino acid supplementation on hgh levels show conflicting results (andreassen ; de lemos and vigen ). greater and more consistent increases in hgh concentrations after amino acid consumption were found in women as compared to men (chromiak and antonio ). therefore, in this study we aimed […]

PMCID: 5611983
PMID: 28858851
DOI: 10.18632/aging.101271

[…] 37°c in a humidified atmosphere with 5% co2 and 95% air. cells were passaged every two days., pre-mir-338, anti-sense of mir-338(define as as-mir-338) plasmids and plain vectors were purchased from vigen company (shandong, china). the pkm2 plasmid, short hairpin (sh)-pkm2 plasmid and plain vector were kindly provided by lingchao chen, m.d. (department of neurosurgery, huashan hospital, fudan […]

PMCID: 5154949
PMID: 27903604
DOI: 10.1084/jem.20161462

[…] institutes of health grants r35 ca197633, p01 ca168585, 1u54 ca199090, and r01 ca170689, the parker institute for cancer immunotherapy, the ressler family foundation, the dr. robert vigen memorial fund, the grimaldi family fund, the samuels family fund, the garcia-corsini family fund, and stand up to cancer – cancer research institute (su2c-cri) cancer immunology dream team […]

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viGEN institution(s)
Innovation Center for Biomedical Informatics, Georgetown University, WA, DC, USA

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