Vipie specifications

Information


Unique identifier OMICS_18470
Name Vipie
Interface Web user interface
Restrictions to use Academic or non-commercial use
Input data A set of files from virome metagenomics NGS.
Input format FASTQ
Programming languages Javascript, Python, R
Computer skills Basic
Stability Stable
Maintained Yes

Documentation


Maintainers


  • person_outline Ondrej Cinek <>
  • person_outline Matti Nykter <>
  • person_outline Heikki Hyoty <>

Additional information


A registration is needed to access to tool. https://sourceforge.net/projects/vipie

Information


Unique identifier OMICS_18470
Name Vipie
Software type Pipeline/Workflow
Interface Command line interface
Restrictions to use Academic or non-commercial use
Input data A set of files from virome metagenomics NGS.
Input format FASTQ
Operating system Unix/Linux
Programming languages Javascript, Python, R
Computer skills Advanced
Stability Stable
Maintained Yes

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Documentation


Maintainers


  • person_outline Ondrej Cinek <>
  • person_outline Matti Nykter <>
  • person_outline Heikki Hyoty <>

Additional information


A registration is needed to access to tool. https://sourceforge.net/projects/vipie

Publication for Vipie

Vipie institution(s)
BioMediTech and Faculty of Medicine and Life Sciences, University of Tampere, Tampere, Finland; Department of Pediatrics, 2nd Faculty of Medicine, Charles University and University Hospital Motol, Praha, Czech Republic; School of Social Sciences, University of Tampere, Tampere, Finland; Fimlab Laboratories, Pirkanmaa Hospital District, Tampere, Finland
Vipie funding source(s)
Supported by the University of Tampere’s BioMediTech Doctoral School, National technology Agency in Finland and Ministry of Health of the Czech Republic, AZV 15-31426A.

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