vConTACT specifications

Unique identifier:
OMICS_22173
Software type:
Application/Script
Restrictions to use:
None
Input format:
CSV
Programming languages:
Python
Computer skills:
Advanced
Maintained:
No
Name:
Viral CONTigs Automatic Clustering and Taxonomy
Interface:
Command line interface
Input data:
Some viral sequences.
Operating system:
Unix/Linux
License:
GNU General Public License version 3.0
Requirements:
Numpy, Scipy, Biopython, Pandas

versioning

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vConTACT distribution

download

vConTACT support

Maintainers

This tool is not maintained anymore.

forum

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Publications

Institution(s)

Department of Microbiology, Ohio State University, Columbus, OH, USA; Institut de Biologie de l’ENS (IBENS), École normale supérieure, PSL Research University, Paris, France; ESPCI, PSL Research University, Paris, France; Department of Chemistry and Biochemistry, Ohio State University, Columbus, OH, USA; Department of Civil, Environmental and Geodetic Engineering, Ohio State University, Columbus, OH, USA

Funding source(s)

Supported by awards from the US Department of Energy, Office of Science, Office of Biological and Environmental Research under the Genomic Science program (DE-SC0010580), the National Science Foundation (OCE-1536989), and the Gordon and Betty Moore Foundation (#3790, 3305) and computational resources provided by the Ohio Supercomputer Center (1987).

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