VirSorter specifications

Unique identifier:
OMICS_11702
Restrictions to use:
None
Input format:
FASTA
Computer skills:
Basic
Stability:
Stable
Interface:
Web user interface
Input data:
Microbial genome(s) (draft or completely assembled)
Output data:
FASTA, GenBank, CSV
Version:
1.0.2
Maintained:
Yes
  • Eubacteria

VirSorter specifications

Unique identifier:
OMICS_11702
Interface:
Command line interface
Input data:
Microbial genome(s) (draft or completely assembled)
Output data:
FASTA, GenBank, CSV
Computer skills:
Advanced
Requirements:
HMMER, MCL, Metagene Annotator, MUSCLE, BLAST
Software type:
Package/Module
Restrictions to use:
None
Input format:
FASTA
Operating system:
Unix/Linux
Stability:
Stable
Maintained:
Yes
  • Eubacteria

versioning

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VirSorter distribution

download

VirSorter support

Maintainer

  • Simon Roux <>
  • Simon Roux <>

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Credits

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Publications

Institution(s)

Ecology and Evolutionary Biology, University of Arizona, AZ, USA; Clermont Université, Université Blaise Pascal, Laboratoire “Microorganismes: Génome et Environnement”, Clermont-Ferrand, France; CNRS UMR 6023, LMGE, Aubière, France; Department of Agricultural and Biosystems Engineering, University of Arizona, AZ, USA

Funding source(s)

Gordon and Betty Moore Foundation #3790; University of Arizona Ecosystem Genomics Institute

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