Main logo
?
tutorial arrow
×
Submit new tools
Share tools covering the current topic. Provide easy-to-follow guidelines to improve their usability.
Share new tools with the community
Sign up for free to promote the availability of bioinformatics tools

Virus identification software tools | Small RNA sequencing data analysis

Accurate detection of viruses in plants and animals is critical for agriculture production and human health. Deep sequencing and assembly of virus-derived small interfering RNAs has proven to be a highly efficient approach for virus discovery.

G T A T C G C T A
VirusDetect
Web
Desktop

VirusDetect

A bioinformatics pipeline that can efficiently analyze largescale small RNA…

A bioinformatics pipeline that can efficiently analyze largescale small RNA (sRNA) datasets for both known and novel virus identification. VirusDetect performs both reference-guided assemblies…

G T A T C G C T A
viRome
Desktop

viRome

Separates visualization from alignment. viRome is an R package that analyses…

Separates visualization from alignment. viRome is an R package that analyses short-read next-generation sequencing (NGS) data from virus-infection studies where the siRNA or piRNA pathways have been…

G T A T C G C T A
SearchSmallRNA
Desktop

SearchSmallRNA

A mapping package with a graphical interface to the assemblage of viral genomes…

A mapping package with a graphical interface to the assemblage of viral genomes from small RNA dataset obtained by NGS. SearchSmallRNA presents the data graphically and shows statistical analyses…

G T A T C G C T A
MISIS
Desktop

MISIS

A tool to view and analyze sRNA maps of genomic loci and viruses which spawn…

A tool to view and analyze sRNA maps of genomic loci and viruses which spawn multiple sRNAs.

Information

By using OMICtools you acknowledge that you have read and accepted the terms of the end user license agreement.