VisBio statistics

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Citations per year

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Popular tool citations

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Tool usage distribution map

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Associated diseases

Associated diseases

VisBio specifications


Unique identifier OMICS_13520
Name VisBio
Software type Package/Module
Interface Graphical user interface
Restrictions to use None
Input data A diversity of biological file formats using the Bio-Formats library
Operating system Unix/Linux, Mac OS, Windows
Programming languages Java
License GNU General Public License version 2.0
Computer skills Medium
Version 3.40
Stability Stable
Maintained Yes


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  • person_outline Kevin Eliceiri <>

Publications for VisBio

VisBio in publications

PMCID: 2386807
PMID: 18442412
DOI: 10.1186/1741-7015-6-11

[…] acquisition package developed at loci (laboratory for optical and computational instrumentation, university of wisconsin, madison, wi) and image analysis for mpe/shg was performed with imagej and visbio [] software. for tacs-1 image analysis, additional surface rendering plug-ins for imagej were utilized []. for tacs-2 and -3, imagej was used to quantify the collagen fiber angle relative […]

PMCID: 1781458
PMID: 17190588
DOI: 10.1186/1741-7015-4-38

[…] package developed at loci (laboratory for optical and computational instrumentation, university of wisconsin, madison, wi, usa). image analysis for combined mpe-shg was performed with imagej [] and visbio [] software. using imagej, differences in collagen density were quantified by measuring the area of collagen signal following density slicing from a constant threshold, and local and mean […]

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VisBio institution(s)
Laboratory for Optical and Computational Instrumentation, University of Wisconsin at Madison, Madison, WI, USA
VisBio funding source(s)
National Institutes of Health (NIH) National Institute of Biomedical Imaging and BioEngineering (NIBIB) grant no. EB10084

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